From 1edbf9bf4e3a241c9af299664cc63098d9e6ca46 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:43:00 +0200
Subject: [PATCH 01/25] Add test github action.

---
 .github/workflows/test.yml | 12 ++++++++++++
 1 file changed, 12 insertions(+)
 create mode 100644 .github/workflows/test.yml

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
new file mode 100644
index 0000000..ede8960
--- /dev/null
+++ b/.github/workflows/test.yml
@@ -0,0 +1,12 @@
+name: Run tests
+run-name: ${{github-actor}} testsing freesasa-python
+on: [push]
+jobs:
+  Run-Tests:
+  steps:
+    - run: echo "Running GHA"
+    - name: "Check out code"
+      uses: actions/checkout@v3
+    - name: List files in the repository
+        run: |
+          ls ${{ github.workspace }}

From c37624499e97b304d22729224ca4636cdca05ac9 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:45:20 +0200
Subject: [PATCH 02/25] Add status.

---
 .github/workflows/test.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index ede8960..de0faee 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -10,3 +10,4 @@ jobs:
     - name: List files in the repository
         run: |
           ls ${{ github.workspace }}
+    - run: echo "🍏 This job's status is ${{ job.status }}."

From 5dbd73bcc736f88182bdc46ab6ae4b83eea5924f Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:46:15 +0200
Subject: [PATCH 03/25] Fix syntax error.

---
 .github/workflows/test.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index de0faee..00fab49 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -8,6 +8,6 @@ jobs:
     - name: "Check out code"
       uses: actions/checkout@v3
     - name: List files in the repository
-        run: |
-          ls ${{ github.workspace }}
+      run: |
+        ls ${{ github.workspace }}
     - run: echo "🍏 This job's status is ${{ job.status }}."

From 92e2612b6bd9f9737005f92c2748998446ab7489 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:47:42 +0200
Subject: [PATCH 04/25] Fix syntax error.

---
 .github/workflows/test.yml | 17 +++++++++--------
 1 file changed, 9 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 00fab49..3d1b368 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -3,11 +3,12 @@ run-name: ${{github-actor}} testsing freesasa-python
 on: [push]
 jobs:
   Run-Tests:
-  steps:
-    - run: echo "Running GHA"
-    - name: "Check out code"
-      uses: actions/checkout@v3
-    - name: List files in the repository
-      run: |
-        ls ${{ github.workspace }}
-    - run: echo "🍏 This job's status is ${{ job.status }}."
+    runs-on: ubuntu-latest
+    steps:
+      - run: echo "Running GHA"
+      - name: "Check out code"
+        uses: actions/checkout@v3
+      - name: List files in the repository
+        run: |
+          ls ${{ github.workspace }}
+      - run: echo "🍏 This job's status is ${{ job.status }}."

From 9d1466fb69730b4ab24dd5e0602db6268027a505 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:48:33 +0200
Subject: [PATCH 05/25] Fix syntax error.

---
 .github/workflows/test.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 3d1b368..da7ffa9 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -1,5 +1,5 @@
 name: Run tests
-run-name: ${{github-actor}} testsing freesasa-python
+run-name: ${{ github.actor }} testsing freesasa-python
 on: [push]
 jobs:
   Run-Tests:

From a8350debe9ed07128716037f9aaec1547ec6b9fc Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:53:28 +0200
Subject: [PATCH 06/25] Add build and test.

---
 .github/workflows/test.yml | 21 ++++++++++++++++-----
 1 file changed, 16 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index da7ffa9..33a8cef 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -2,13 +2,24 @@ name: Run tests
 run-name: ${{ github.actor }} testsing freesasa-python
 on: [push]
 jobs:
-  Run-Tests:
+  build:
     runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ["3.7", "3.8", "3.9", "3.10"]
     steps:
-      - run: echo "Running GHA"
       - name: "Check out code"
         uses: actions/checkout@v3
-      - name: List files in the repository
+      - name: "Get FreeSASA C library"
+        run: git submodule update --init
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
         run: |
-          ls ${{ github.workspace }}
-      - run: echo "🍏 This job's status is ${{ job.status }}."
+          python -m pip install --upgrade pip
+          pip install -r requirements.txt
+          python setup.py install
+      - name: Run tests
+        run: python setup.py test

From 3ee7d00635a5443d529b75918dc03ddd560bacff Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 15:57:20 +0200
Subject: [PATCH 07/25] Add USE_CYTHON and pip cache.

---
 .github/workflows/test.yml | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 33a8cef..269eeb7 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -16,10 +16,11 @@ jobs:
         uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
+          cache: "pip"
       - name: Install dependencies
         run: |
           python -m pip install --upgrade pip
           pip install -r requirements.txt
           python setup.py install
       - name: Run tests
-        run: python setup.py test
+        run: USE_CYTHON=1 python setup.py test

From 7877ea6b7f6a457974ea379f23c5b86cf6839ef5 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Tue, 4 Oct 2022 16:00:27 +0200
Subject: [PATCH 08/25] Simpler setup for basic tests.

---
 .github/workflows/test.yml | 9 +++------
 1 file changed, 3 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml
index 269eeb7..ffd86eb 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test.yml
@@ -1,12 +1,9 @@
 name: Run tests
-run-name: ${{ github.actor }} testsing freesasa-python
+run-name: ${{ github.actor }} testing freesasa-python
 on: [push]
 jobs:
-  build:
+  Test:
     runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        python-version: ["3.7", "3.8", "3.9", "3.10"]
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
@@ -15,7 +12,7 @@ jobs:
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4
         with:
-          python-version: ${{ matrix.python-version }}
+          python-version: "3.10"
           cache: "pip"
       - name: Install dependencies
         run: |

From 9d6b34c09cef8840fbcba2068c15c71e88e421e5 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 18:38:27 +0200
Subject: [PATCH 09/25] Add more comprehensive tests for master branch.

---
 .github/workflows/test-push-master.yml        | 27 +++++++++++++++++++
 .github/workflows/{test.yml => test-push.yml} |  4 ++-
 2 files changed, 30 insertions(+), 1 deletion(-)
 create mode 100644 .github/workflows/test-push-master.yml
 rename .github/workflows/{test.yml => test-push.yml} (94%)

diff --git a/.github/workflows/test-push-master.yml b/.github/workflows/test-push-master.yml
new file mode 100644
index 0000000..98b00d6
--- /dev/null
+++ b/.github/workflows/test-push-master.yml
@@ -0,0 +1,27 @@
+name: Run tests on several python versions
+run-name: ${{ github.actor }} testing freesasa-python
+on:
+  push:
+    branches: master
+jobs:
+  Test:
+    runs-on: ubuntu-latest
+    matrix:
+      python-version: ["3.7", "3.8", "3.9", "3.10"]
+    steps:
+      - name: "Check out code"
+        uses: actions/checkout@v3
+      - name: "Get FreeSASA C library"
+        run: git submodule update --init
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: "3.10"
+          cache: "pip"
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -r requirements.txt
+          python setup.py install
+      - name: Run tests
+        run: USE_CYTHON=1 python setup.py test
diff --git a/.github/workflows/test.yml b/.github/workflows/test-push.yml
similarity index 94%
rename from .github/workflows/test.yml
rename to .github/workflows/test-push.yml
index ffd86eb..6de06c2 100644
--- a/.github/workflows/test.yml
+++ b/.github/workflows/test-push.yml
@@ -1,6 +1,8 @@
 name: Run tests
 run-name: ${{ github.actor }} testing freesasa-python
-on: [push]
+on:
+  push:
+    branches-ignore: master
 jobs:
   Test:
     runs-on: ubuntu-latest

From 49543cfab0c43917d1363f465fe481b860a6b93d Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 18:39:30 +0200
Subject: [PATCH 10/25] Fix conflicting python versions.

---
 .github/workflows/test-push-master.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/test-push-master.yml b/.github/workflows/test-push-master.yml
index 98b00d6..cbd7233 100644
--- a/.github/workflows/test-push-master.yml
+++ b/.github/workflows/test-push-master.yml
@@ -16,7 +16,6 @@ jobs:
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4
         with:
-          python-version: "3.10"
           cache: "pip"
       - name: Install dependencies
         run: |

From 3c081636aba658af6ebcff4f903f970a3406ba77 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 18:39:58 +0200
Subject: [PATCH 11/25] Remove travis and appveyor configs.

---
 .travis.yml               |  64 -----------
 appveyor.yml              | 110 ------------------
 appveyor/install.ps1      | 229 --------------------------------------
 appveyor/run_with_env.cmd |  88 ---------------
 4 files changed, 491 deletions(-)
 delete mode 100644 .travis.yml
 delete mode 100644 appveyor.yml
 delete mode 100644 appveyor/install.ps1
 delete mode 100644 appveyor/run_with_env.cmd

diff --git a/.travis.yml b/.travis.yml
deleted file mode 100644
index 20dc540..0000000
--- a/.travis.yml
+++ /dev/null
@@ -1,64 +0,0 @@
-# A lot of inspiration from https://github.com/project-rig/rig_c_sa
-
-# could be done using language python and a more complicated matrix,
-# but this allows us to use the same setup on mac and linux
-language: generic
-
-sudo: false
-
-cache:
-  directories:
-    - "$HOME/.cache/pip"
-    - "$HOME/.pyenv_cache"
-
-dist: xenial
-os:
-  - linux
-  - osx
-
-env:
-  matrix:
-    - PYVER=3.7
-    - PYVER=3.8
-    - PYVER=3.9
-  global:
-    - USE_CYTHON=1
-
-install:
-  # Install 'pyenv': a utility for downloading and switching between multiple
-  # Python interpreters on the same system.
-  - git clone https://github.com/yyuu/pyenv.git ~/.pyenv
-  - PYENV_ROOT="$HOME/.pyenv"
-  - PATH="$PYENV_ROOT/bin:$PATH"
-  - eval "$(pyenv init --path)"
-  # Install the latest release of the specified Python version using pyenv.
-  - PYVER="$(pyenv install --list | grep -E "^\\s*$PYVER" | sort -n -t. -k3 | tail -n1)"
-  - echo "Selected Python $PYVER"
-  - pyenv install $PYVER
-  # Make the newly installed version the default "python" command.
-  - pyenv global $PYVER
-  - python --version
-  - pip install --upgrade pip
-  - pip install -r requirements.txt
-  - git submodule update --init
-
-script:
-  - python setup.py install
-  - python setup.py test
-
-after_success:
-  - >
-    if [ -n "$TRAVIS_TAG" ]; then
-        # can only upload binaries for osx
-        if [ "x$TRAVIS_OS_NAME" == "xosx" ]; then
-            python setup.py bdist_wheel;
-            # only submit sdist once
-            if [ "x$PYVER" == "x3.8" ]; then
-                python setup.py sdist
-            fi
-        fi
-        # twine env variables are set in Travis web config
-        twine upload --skip-existing dist/*;
-    else
-        echo "Will only deploy tagged releases"
-    fi
diff --git a/appveyor.yml b/appveyor.yml
deleted file mode 100644
index 504460e..0000000
--- a/appveyor.yml
+++ /dev/null
@@ -1,110 +0,0 @@
-environment:
-  global:
-    # SDK v7.0 MSVC Express 2008's SetEnv.cmd script will fail if the
-    # /E:ON and /V:ON options are not enabled in the batch script intepreter
-    # See: http://stackoverflow.com/a/13751649/163740
-    CMD_IN_ENV: "cmd /E:ON /V:O N /C .\\appveyor\\run_with_env.cmd"
-    USE_CYTHON: 1
-    REQUIREMENTS: requirements.txt
-    TWINE_USERNAME: mittinatten
-    TWINE_PASSWORD:
-      secure: PE3DJXf2VYmUlH1Vo6CoMA==
-
-  matrix:
-    # Pre-installed Python versions, which Appveyor may upgrade to
-    # a later point release.
-    # See: http://www.appveyor.com/docs/installed-software#python
-
-    - PYTHON: "C:\\Python36"
-      PYTHON_VERSION: "3.6.x"
-      PYTHON_ARCH: "32"
-
-    - PYTHON: "C:\\Python36-x64"
-      PYTHON_VERSION: "3.6.x"
-      PYTHON_ARCH: "64"
-
-    - PYTHON: "C:\\Python37"
-      PYTHON_VERSION: "3.7.x"
-      PYTHON_ARCH: "32"
-
-    - PYTHON: "C:\\Python37-x64"
-      PYTHON_VERSION: "3.7.x"
-      PYTHON_ARCH: "64"
-
-    - PYTHON: "C:\\Python38"
-      PYTHON_VERSION: "3.8.x"
-      PYTHON_ARCH: "32"
-
-    - PYTHON: "C:\\Python38-x64"
-      PYTHON_VERSION: "3.8.x"
-      PYTHON_ARCH: "64"
-
-    - PYTHON: "C:\\Python39"
-      PYTHON_VERSION: "3.9.x"
-      PYTHON_ARCH: "32"
-
-    - PYTHON: "C:\\Python39-x64"
-      PYTHON_VERSION: "3.9.x"
-      PYTHON_ARCH: "64"
-
-install:
-  # If there is a newer build queued for the same PR, cancel this one.
-  # The AppVeyor 'rollout builds' option is supposed to serve the same
-  # purpose but it is problematic because it tends to cancel builds pushed
-  # directly to master instead of just PR builds (or the converse).
-  # credits: JuliaLang developers.
-  - ps:
-      if ($env:APPVEYOR_PULL_REQUEST_NUMBER -and $env:APPVEYOR_BUILD_NUMBER -ne ((Invoke-RestMethod `
-      https://ci.appveyor.com/api/projects/$env:APPVEYOR_ACCOUNT_NAME/$env:APPVEYOR_PROJECT_SLUG/history?recordsNumber=50).builds | `
-      Where-Object pullRequestId -eq $env:APPVEYOR_PULL_REQUEST_NUMBER)[0].buildNumber) { `
-      throw "There are newer queued builds for this pull request, failing early." }
-  - ECHO "Filesystem root:"
-  - ps: 'ls "C:/"'
-
-  - ECHO "Installed SDKs:"
-  - ps: 'ls "C:/Program Files/Microsoft SDKs/Windows"'
-
-  # Install Python (from the official .msi of http://python.org) and pip when
-  # not already installed.
-  - ps: if (-not(Test-Path($env:PYTHON))) { & appveyor\install.ps1 }
-
-  # Prepend newly installed Python to the PATH of this build (this cannot be
-  # done from inside the powershell script as it would require to restart
-  # the parent CMD process).
-  - "SET PATH=%PYTHON%;%PYTHON%\\Scripts;%PATH%"
-
-  # Check that we have the expected version and architecture for Python
-  - "python --version"
-  - 'python -c "import struct; print(struct.calcsize(''P'') * 8)"'
-
-  # Upgrade to the latest version of pip to avoid it displaying warnings
-  # about it being out of date.
-  - "python -m pip install --upgrade pip"
-
-  # Install the build dependencies of the project. If some dependencies contain
-  # compiled extensions and are not provided as pre-built wheel packages,
-  # pip will build them from source using the MSVC compiler matching the
-  # target Python version and architecture
-  - "%CMD_IN_ENV% pip install -r %REQUIREMENTS%"
-
-  - git submodule update --init
-
-build_script:
-  # Build the compiled extension
-  - "%CMD_IN_ENV% python setup.py build"
-
-test_script:
-  # Run the project tests
-  - "%CMD_IN_ENV% python setup.py test"
-
-after_test:
-  # If tests are successful, create binary packages for the project.
-  - "%CMD_IN_ENV% python setup.py bdist_wheel"
-  - ps: "ls dist"
-
-artifacts:
-  - path: dist\*
-    name: pypiartifacts
-
-deploy_script:
-  - if "%APPVEYOR_REPO_TAG%"=="true" ( twine upload dist\* --skip-existing ) else ( echo "Will only deploy tagged commits" )
diff --git a/appveyor/install.ps1 b/appveyor/install.ps1
deleted file mode 100644
index 160ba55..0000000
--- a/appveyor/install.ps1
+++ /dev/null
@@ -1,229 +0,0 @@
-# Sample script to install Python and pip under Windows
-# Authors: Olivier Grisel, Jonathan Helmus, Kyle Kastner, and Alex Willmer
-# License: CC0 1.0 Universal: http://creativecommons.org/publicdomain/zero/1.0/
-
-$MINICONDA_URL = "http://repo.continuum.io/miniconda/"
-$BASE_URL = "https://www.python.org/ftp/python/"
-$GET_PIP_URL = "https://bootstrap.pypa.io/get-pip.py"
-$GET_PIP_PATH = "C:\get-pip.py"
-
-$PYTHON_PRERELEASE_REGEX = @"
-(?x)
-(?<major>\d+)
-\.
-(?<minor>\d+)
-\.
-(?<micro>\d+)
-(?<prerelease>[a-z]{1,2}\d+)
-"@
-
-
-function Download ($filename, $url) {
-    $webclient = New-Object System.Net.WebClient
-
-    $basedir = $pwd.Path + "\"
-    $filepath = $basedir + $filename
-    if (Test-Path $filename) {
-        Write-Host "Reusing" $filepath
-        return $filepath
-    }
-
-    # Download and retry up to 3 times in case of network transient errors.
-    Write-Host "Downloading" $filename "from" $url
-    $retry_attempts = 2
-    for ($i = 0; $i -lt $retry_attempts; $i++) {
-        try {
-            $webclient.DownloadFile($url, $filepath)
-            break
-        }
-        Catch [Exception]{
-            Start-Sleep 1
-        }
-    }
-    if (Test-Path $filepath) {
-        Write-Host "File saved at" $filepath
-    } else {
-        # Retry once to get the error message if any at the last try
-        $webclient.DownloadFile($url, $filepath)
-    }
-    return $filepath
-}
-
-
-function ParsePythonVersion ($python_version) {
-    if ($python_version -match $PYTHON_PRERELEASE_REGEX) {
-        return ([int]$matches.major, [int]$matches.minor, [int]$matches.micro,
-                $matches.prerelease)
-    }
-    $version_obj = [version]$python_version
-    return ($version_obj.major, $version_obj.minor, $version_obj.build, "")
-}
-
-
-function DownloadPython ($python_version, $platform_suffix) {
-    $major, $minor, $micro, $prerelease = ParsePythonVersion $python_version
-
-    if (($major -le 2 -and $micro -eq 0) `
-        -or ($major -eq 3 -and $minor -le 2 -and $micro -eq 0) `
-        ) {
-        $dir = "$major.$minor"
-        $python_version = "$major.$minor$prerelease"
-    } else {
-        $dir = "$major.$minor.$micro"
-    }
-
-    if ($prerelease) {
-        if (($major -le 2) `
-            -or ($major -eq 3 -and $minor -eq 1) `
-            -or ($major -eq 3 -and $minor -eq 2) `
-            -or ($major -eq 3 -and $minor -eq 3) `
-            ) {
-            $dir = "$dir/prev"
-        }
-    }
-
-    if (($major -le 2) -or ($major -le 3 -and $minor -le 4)) {
-        $ext = "msi"
-        if ($platform_suffix) {
-            $platform_suffix = ".$platform_suffix"
-        }
-    } else {
-        $ext = "exe"
-        if ($platform_suffix) {
-            $platform_suffix = "-$platform_suffix"
-        }
-    }
-
-    $filename = "python-$python_version$platform_suffix.$ext"
-    $url = "$BASE_URL$dir/$filename"
-    $filepath = Download $filename $url
-    return $filepath
-}
-
-
-function InstallPython ($python_version, $architecture, $python_home) {
-    Write-Host "Installing Python" $python_version "for" $architecture "bit architecture to" $python_home
-    if (Test-Path $python_home) {
-        Write-Host $python_home "already exists, skipping."
-        return $false
-    }
-    if ($architecture -eq "32") {
-        $platform_suffix = ""
-    } else {
-        $platform_suffix = "amd64"
-    }
-    $installer_path = DownloadPython $python_version $platform_suffix
-    $installer_ext = [System.IO.Path]::GetExtension($installer_path)
-    Write-Host "Installing $installer_path to $python_home"
-    $install_log = $python_home + ".log"
-    if ($installer_ext -eq '.msi') {
-        InstallPythonMSI $installer_path $python_home $install_log
-    } else {
-        InstallPythonEXE $installer_path $python_home $install_log
-    }
-    if (Test-Path $python_home) {
-        Write-Host "Python $python_version ($architecture) installation complete"
-    } else {
-        Write-Host "Failed to install Python in $python_home"
-        Get-Content -Path $install_log
-        Exit 1
-    }
-}
-
-
-function InstallPythonEXE ($exepath, $python_home, $install_log) {
-    $install_args = "/quiet InstallAllUsers=1 TargetDir=$python_home"
-    RunCommand $exepath $install_args
-}
-
-
-function InstallPythonMSI ($msipath, $python_home, $install_log) {
-    $install_args = "/qn /log $install_log /i $msipath TARGETDIR=$python_home"
-    $uninstall_args = "/qn /x $msipath"
-    RunCommand "msiexec.exe" $install_args
-    if (-not(Test-Path $python_home)) {
-        Write-Host "Python seems to be installed else-where, reinstalling."
-        RunCommand "msiexec.exe" $uninstall_args
-        RunCommand "msiexec.exe" $install_args
-    }
-}
-
-function RunCommand ($command, $command_args) {
-    Write-Host $command $command_args
-    Start-Process -FilePath $command -ArgumentList $command_args -Wait -Passthru
-}
-
-
-function InstallPip ($python_home) {
-    $pip_path = $python_home + "\Scripts\pip.exe"
-    $python_path = $python_home + "\python.exe"
-    if (-not(Test-Path $pip_path)) {
-        Write-Host "Installing pip..."
-        $webclient = New-Object System.Net.WebClient
-        $webclient.DownloadFile($GET_PIP_URL, $GET_PIP_PATH)
-        Write-Host "Executing:" $python_path $GET_PIP_PATH
-        & $python_path $GET_PIP_PATH
-    } else {
-        Write-Host "pip already installed."
-    }
-}
-
-
-function DownloadMiniconda ($python_version, $platform_suffix) {
-    if ($python_version -eq "3.4") {
-        $filename = "Miniconda3-3.5.5-Windows-" + $platform_suffix + ".exe"
-    } else {
-        $filename = "Miniconda-3.5.5-Windows-" + $platform_suffix + ".exe"
-    }
-    $url = $MINICONDA_URL + $filename
-    $filepath = Download $filename $url
-    return $filepath
-}
-
-
-function InstallMiniconda ($python_version, $architecture, $python_home) {
-    Write-Host "Installing Python" $python_version "for" $architecture "bit architecture to" $python_home
-    if (Test-Path $python_home) {
-        Write-Host $python_home "already exists, skipping."
-        return $false
-    }
-    if ($architecture -eq "32") {
-        $platform_suffix = "x86"
-    } else {
-        $platform_suffix = "x86_64"
-    }
-    $filepath = DownloadMiniconda $python_version $platform_suffix
-    Write-Host "Installing" $filepath "to" $python_home
-    $install_log = $python_home + ".log"
-    $args = "/S /D=$python_home"
-    Write-Host $filepath $args
-    Start-Process -FilePath $filepath -ArgumentList $args -Wait -Passthru
-    if (Test-Path $python_home) {
-        Write-Host "Python $python_version ($architecture) installation complete"
-    } else {
-        Write-Host "Failed to install Python in $python_home"
-        Get-Content -Path $install_log
-        Exit 1
-    }
-}
-
-
-function InstallMinicondaPip ($python_home) {
-    $pip_path = $python_home + "\Scripts\pip.exe"
-    $conda_path = $python_home + "\Scripts\conda.exe"
-    if (-not(Test-Path $pip_path)) {
-        Write-Host "Installing pip..."
-        $args = "install --yes pip"
-        Write-Host $conda_path $args
-        Start-Process -FilePath "$conda_path" -ArgumentList $args -Wait -Passthru
-    } else {
-        Write-Host "pip already installed."
-    }
-}
-
-function main () {
-    InstallPython $env:PYTHON_VERSION $env:PYTHON_ARCH $env:PYTHON
-    InstallPip $env:PYTHON
-}
-
-main
diff --git a/appveyor/run_with_env.cmd b/appveyor/run_with_env.cmd
deleted file mode 100644
index 5da547c..0000000
--- a/appveyor/run_with_env.cmd
+++ /dev/null
@@ -1,88 +0,0 @@
-:: To build extensions for 64 bit Python 3, we need to configure environment
-:: variables to use the MSVC 2010 C++ compilers from GRMSDKX_EN_DVD.iso of:
-:: MS Windows SDK for Windows 7 and .NET Framework 4 (SDK v7.1)
-::
-:: To build extensions for 64 bit Python 2, we need to configure environment
-:: variables to use the MSVC 2008 C++ compilers from GRMSDKX_EN_DVD.iso of:
-:: MS Windows SDK for Windows 7 and .NET Framework 3.5 (SDK v7.0)
-::
-:: 32 bit builds, and 64-bit builds for 3.5 and beyond, do not require specific
-:: environment configurations.
-::
-:: Note: this script needs to be run with the /E:ON and /V:ON flags for the
-:: cmd interpreter, at least for (SDK v7.0)
-::
-:: More details at:
-:: https://github.com/cython/cython/wiki/64BitCythonExtensionsOnWindows
-:: http://stackoverflow.com/a/13751649/163740
-::
-:: Author: Olivier Grisel
-:: License: CC0 1.0 Universal: http://creativecommons.org/publicdomain/zero/1.0/
-::
-:: Notes about batch files for Python people:
-::
-:: Quotes in values are literally part of the values:
-::      SET FOO="bar"
-:: FOO is now five characters long: " b a r "
-:: If you don't want quotes, don't include them on the right-hand side.
-::
-:: The CALL lines at the end of this file look redundant, but if you move them
-:: outside of the IF clauses, they do not run properly in the SET_SDK_64==Y
-:: case, I don't know why.
-@ECHO OFF
-
-SET COMMAND_TO_RUN=%*
-SET WIN_SDK_ROOT=C:\Program Files\Microsoft SDKs\Windows
-SET WIN_WDK=c:\Program Files (x86)\Windows Kits\10\Include\wdf
-
-:: Extract the major and minor versions, and allow for the minor version to be
-:: more than 9.  This requires the version number to have two dots in it.
-SET MAJOR_PYTHON_VERSION=%PYTHON_VERSION:~0,1%
-IF "%PYTHON_VERSION:~3,1%" == "." (
-    SET MINOR_PYTHON_VERSION=%PYTHON_VERSION:~2,1%
-) ELSE (
-    SET MINOR_PYTHON_VERSION=%PYTHON_VERSION:~2,2%
-)
-
-:: Based on the Python version, determine what SDK version to use, and whether
-:: to set the SDK for 64-bit.
-IF %MAJOR_PYTHON_VERSION% == 2 (
-    SET WINDOWS_SDK_VERSION="v7.0"
-    SET SET_SDK_64=Y
-) ELSE (
-    IF %MAJOR_PYTHON_VERSION% == 3 (
-        SET WINDOWS_SDK_VERSION="v7.1"
-        IF %MINOR_PYTHON_VERSION% LEQ 4 (
-            SET SET_SDK_64=Y
-        ) ELSE (
-            SET SET_SDK_64=N
-            IF EXIST "%WIN_WDK%" (
-                :: See: https://connect.microsoft.com/VisualStudio/feedback/details/1610302/
-                REN "%WIN_WDK%" 0wdf
-            )
-        )
-    ) ELSE (
-        ECHO Unsupported Python version: "%MAJOR_PYTHON_VERSION%"
-        EXIT 1
-    )
-)
-
-IF %PYTHON_ARCH% == 64 (
-    IF %SET_SDK_64% == Y (
-        ECHO Configuring Windows SDK %WINDOWS_SDK_VERSION% for Python %MAJOR_PYTHON_VERSION% on a 64 bit architecture
-        SET DISTUTILS_USE_SDK=1
-        SET MSSdk=1
-        "%WIN_SDK_ROOT%\%WINDOWS_SDK_VERSION%\Setup\WindowsSdkVer.exe" -q -version:%WINDOWS_SDK_VERSION%
-        "%WIN_SDK_ROOT%\%WINDOWS_SDK_VERSION%\Bin\SetEnv.cmd" /x64 /release
-        ECHO Executing: %COMMAND_TO_RUN%
-        call %COMMAND_TO_RUN% || EXIT 1
-    ) ELSE (
-        ECHO Using default MSVC build environment for 64 bit architecture
-        ECHO Executing: %COMMAND_TO_RUN%
-        call %COMMAND_TO_RUN% || EXIT 1
-    )
-) ELSE (
-    ECHO Using default MSVC build environment for 32 bit architecture
-    ECHO Executing: %COMMAND_TO_RUN%
-    call %COMMAND_TO_RUN% || EXIT 1
-)

From 1c6af36a66cdac3734aa003905e6b828be0e56e2 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:08:39 +0200
Subject: [PATCH 12/25] Add publish workflow.

---
 .../{test-push-master.yml => publish.yml}     | 24 +++++++++++++++----
 .github/workflows/test-push.yml               |  4 +---
 2 files changed, 21 insertions(+), 7 deletions(-)
 rename .github/workflows/{test-push-master.yml => publish.yml} (50%)

diff --git a/.github/workflows/test-push-master.yml b/.github/workflows/publish.yml
similarity index 50%
rename from .github/workflows/test-push-master.yml
rename to .github/workflows/publish.yml
index cbd7233..5890ad9 100644
--- a/.github/workflows/test-push-master.yml
+++ b/.github/workflows/publish.yml
@@ -1,12 +1,12 @@
 name: Run tests on several python versions
 run-name: ${{ github.actor }} testing freesasa-python
 on:
-  push:
-    branches: master
+  release:
+    types: [published]
 jobs:
   Test:
-    runs-on: ubuntu-latest
     matrix:
+      os: [macos-latest, windows-latest]
       python-version: ["3.7", "3.8", "3.9", "3.10"]
     steps:
       - name: "Check out code"
@@ -21,6 +21,22 @@ jobs:
         run: |
           python -m pip install --upgrade pip
           pip install -r requirements.txt
-          python setup.py install
+          pip install build
       - name: Run tests
         run: USE_CYTHON=1 python setup.py test
+      - name: Build package
+        run: python -m build
+      - name: Build MacOS wheel
+        run: python setup.py bdist_wheel
+      - name: Build sdist
+        # same source for all versions
+        if:
+          {
+            { matrix.os == 'ubuntu-latest' && matrix.python.version == '3.10' },
+          }
+        run: python setup.py sdist
+      - name: Publish package
+        uses: pypa/gh-action-pypi-publish@27b31702a0e7fc50959f5ad993c78deac1bdfc29
+        with:
+          user: __token__
+          password: ${{ secrets.PYPI_API_TOKEN }}
diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index 6de06c2..e3b12f6 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -1,8 +1,6 @@
 name: Run tests
 run-name: ${{ github.actor }} testing freesasa-python
-on:
-  push:
-    branches-ignore: master
+on: push
 jobs:
   Test:
     runs-on: ubuntu-latest

From 6160c5a6ece8ff7ec7b6f1c7941bd7e392c0ccfc Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:10:10 +0200
Subject: [PATCH 13/25] Clean up.

---
 README.md | 3 ---
 1 file changed, 3 deletions(-)

diff --git a/README.md b/README.md
index 0b8e1ad..4a8eecf 100644
--- a/README.md
+++ b/README.md
@@ -1,8 +1,5 @@
 # FreeSASA Python module
 
-[![Appveyor build status](https://ci.appveyor.com/api/projects/status/nyo51pv2ufj2yhcj/branch/master?svg=true)](https://ci.appveyor.com/project/mittinatten/freesasa-python/branch/master)
-[![Travis build status](https://travis-ci.com/freesasa/freesasa-python.svg?branch=master)](https://travis-ci.com/freesasa/freesasa-python)
-
 The module provides Python bindings for the [FreeSASA C Library](https://github.com/mittinatten/freesasa).
 There are PyPi packages for Python 3.6+, on Linux, Mac OS X and Windows.
 And it can be built from source for 2.7+ (Or by downloading older PyPi packages).

From 665ed9fd9092492ecc56d43b7fb28a83789a0634 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:10:38 +0200
Subject: [PATCH 14/25] Clean up.

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 4a8eecf..db0ec86 100644
--- a/README.md
+++ b/README.md
@@ -1,7 +1,7 @@
 # FreeSASA Python module
 
 The module provides Python bindings for the [FreeSASA C Library](https://github.com/mittinatten/freesasa).
-There are PyPi packages for Python 3.6+, on Linux, Mac OS X and Windows.
+There are PyPi packages for Python 3.7+, on Linux, Mac OS X and Windows.
 And it can be built from source for 2.7+ (Or by downloading older PyPi packages).
 Documentation can be found at http://freesasa.github.io/python/.
 

From da57f5b6d9f08afd3cfa4ca86ad869b943357d21 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:12:27 +0200
Subject: [PATCH 15/25] Test other OSes.

---
 .github/workflows/test-push.yml | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index e3b12f6..c0422fa 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -3,7 +3,9 @@ run-name: ${{ github.actor }} testing freesasa-python
 on: push
 jobs:
   Test:
-    runs-on: ubuntu-latest
+    matrix:
+      os: [ubunut-latest, macos-latest, windows-latest]
+    #runs-on: ubuntu-latest
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3

From 676ad4e07b261ba961732f0a38fac73767594505 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:15:13 +0200
Subject: [PATCH 16/25] Fix gha matrix syntax.

---
 .github/workflows/publish.yml   | 7 ++++---
 .github/workflows/test-push.yml | 5 +++--
 2 files changed, 7 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index 5890ad9..4a10655 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -5,9 +5,10 @@ on:
     types: [published]
 jobs:
   Test:
-    matrix:
-      os: [macos-latest, windows-latest]
-      python-version: ["3.7", "3.8", "3.9", "3.10"]
+    strategy:
+      matrix:
+        os: [macos-latest, windows-latest]
+        python-version: ["3.7", "3.8", "3.9", "3.10"]
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index c0422fa..d235a3d 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -3,8 +3,9 @@ run-name: ${{ github.actor }} testing freesasa-python
 on: push
 jobs:
   Test:
-    matrix:
-      os: [ubunut-latest, macos-latest, windows-latest]
+    strategy:
+      matrix:
+        os: [ubunut-latest, macos-latest, windows-latest]
     #runs-on: ubuntu-latest
     steps:
       - name: "Check out code"

From 6c5e91cb879cffde76534b2f6ce38dbdc7ef7e9b Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:16:16 +0200
Subject: [PATCH 17/25] More syntax fixes.

---
 .github/workflows/publish.yml   | 1 +
 .github/workflows/test-push.yml | 2 +-
 2 files changed, 2 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index 4a10655..4aef880 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -9,6 +9,7 @@ jobs:
       matrix:
         os: [macos-latest, windows-latest]
         python-version: ["3.7", "3.8", "3.9", "3.10"]
+    runs-on: ${{ matrix.os }}
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index d235a3d..4111332 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -6,7 +6,7 @@ jobs:
     strategy:
       matrix:
         os: [ubunut-latest, macos-latest, windows-latest]
-    #runs-on: ubuntu-latest
+    runs-on: ${{ matrix.os }}
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3

From 4e830dcb8623c10269093096b4491a5837559928 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:22:24 +0200
Subject: [PATCH 18/25] Clean up.

---
 .github/workflows/publish.yml   | 4 +++-
 .github/workflows/test-push.yml | 7 ++++---
 2 files changed, 7 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index 4aef880..7f6c055 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -25,7 +25,9 @@ jobs:
           pip install -r requirements.txt
           pip install build
       - name: Run tests
-        run: USE_CYTHON=1 python setup.py test
+        env:
+          USE_CYTHON: 1
+        run: python setup.py test
       - name: Build package
         run: python -m build
       - name: Build MacOS wheel
diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index 4111332..afbf99e 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -5,12 +5,11 @@ jobs:
   Test:
     strategy:
       matrix:
-        os: [ubunut-latest, macos-latest, windows-latest]
+        os: [ubuntu-latest, macos-latest, windows-latest]
     runs-on: ${{ matrix.os }}
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
-      - name: "Get FreeSASA C library"
         run: git submodule update --init
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4
@@ -23,4 +22,6 @@ jobs:
           pip install -r requirements.txt
           python setup.py install
       - name: Run tests
-        run: USE_CYTHON=1 python setup.py test
+        env:
+          USE_CYTHON: 1
+        run: python setup.py test

From 7b549da78d11a7e3ad0a03e21c38ed8b7e284508 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:27:50 +0200
Subject: [PATCH 19/25] Another attempt at USE_CYTHON for windows.

---
 .github/workflows/test-push.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index afbf99e..461a8b9 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -3,6 +3,8 @@ run-name: ${{ github.actor }} testing freesasa-python
 on: push
 jobs:
   Test:
+    env:
+      USE_CYTHON: 1
     strategy:
       matrix:
         os: [ubuntu-latest, macos-latest, windows-latest]
@@ -22,6 +24,4 @@ jobs:
           pip install -r requirements.txt
           python setup.py install
       - name: Run tests
-        env:
-          USE_CYTHON: 1
         run: python setup.py test

From 45a26257639ea4118db0b45cc3e06b02b851dad6 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:30:24 +0200
Subject: [PATCH 20/25] Clean up.

---
 .github/workflows/test-push.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index 461a8b9..24b43b0 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -12,6 +12,7 @@ jobs:
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
+      - name: "Get git submodules"
         run: git submodule update --init
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4

From c5ae1851f550f998e782de59208eeca95a906bc1 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:33:27 +0200
Subject: [PATCH 21/25] Revert to simpler version of push job.

---
 .github/workflows/publish.yml   | 4 +++-
 .github/workflows/test-push.yml | 7 ++-----
 2 files changed, 5 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index 7f6c055..aababd6 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -5,6 +5,8 @@ on:
     types: [published]
 jobs:
   Test:
+    env:
+      USE_CYTHON: 1
     strategy:
       matrix:
         os: [macos-latest, windows-latest]
@@ -13,7 +15,7 @@ jobs:
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
-      - name: "Get FreeSASA C library"
+      - name: "Get upstream C library"
         run: git submodule update --init
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4
diff --git a/.github/workflows/test-push.yml b/.github/workflows/test-push.yml
index 24b43b0..d1db597 100644
--- a/.github/workflows/test-push.yml
+++ b/.github/workflows/test-push.yml
@@ -5,14 +5,11 @@ jobs:
   Test:
     env:
       USE_CYTHON: 1
-    strategy:
-      matrix:
-        os: [ubuntu-latest, macos-latest, windows-latest]
-    runs-on: ${{ matrix.os }}
+    runs-on: ubuntu-latest
     steps:
       - name: "Check out code"
         uses: actions/checkout@v3
-      - name: "Get git submodules"
+      - name: "Get upstream C library"
         run: git submodule update --init
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v4

From 013f0765778ba47dec3b81507f905742a96c0837 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:35:31 +0200
Subject: [PATCH 22/25] Clean up.

---
 .github/workflows/publish.yml | 5 +----
 1 file changed, 1 insertion(+), 4 deletions(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index aababd6..f52ea59 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -36,10 +36,7 @@ jobs:
         run: python setup.py bdist_wheel
       - name: Build sdist
         # same source for all versions
-        if:
-          {
-            { matrix.os == 'ubuntu-latest' && matrix.python.version == '3.10' },
-          }
+        if: ${{ matrix.os == 'ubuntu-latest' && matrix.python.version == '3.10' }}
         run: python setup.py sdist
       - name: Publish package
         uses: pypa/gh-action-pypi-publish@27b31702a0e7fc50959f5ad993c78deac1bdfc29

From f28825beffe5796ec133a89ae04a23f34251482a Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:37:16 +0200
Subject: [PATCH 23/25] Rename job.

---
 .github/workflows/publish.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index f52ea59..cc0ded9 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -4,7 +4,7 @@ on:
   release:
     types: [published]
 jobs:
-  Test:
+  Publish:
     env:
       USE_CYTHON: 1
     strategy:

From 8ed7954a0725527961cb9bc0efb9bdb6fcfc1a23 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:38:21 +0200
Subject: [PATCH 24/25] Rename job.

---
 .github/workflows/publish.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index cc0ded9..32872f2 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -1,4 +1,4 @@
-name: Run tests on several python versions
+name: Publish PyPi package for all platforms
 run-name: ${{ github.actor }} testing freesasa-python
 on:
   release:
@@ -9,7 +9,7 @@ jobs:
       USE_CYTHON: 1
     strategy:
       matrix:
-        os: [macos-latest, windows-latest]
+        os: [macos-latest, windows-latest, ubuntu-latest]
         python-version: ["3.7", "3.8", "3.9", "3.10"]
     runs-on: ${{ matrix.os }}
     steps:

From 75e47148acf91df61000047a72319e87ae326208 Mon Sep 17 00:00:00 2001
From: Simon Mitternacht <simon.mitternacht@gmail.com>
Date: Thu, 6 Oct 2022 19:42:28 +0200
Subject: [PATCH 25/25] Up version to test CI.

---
 setup.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/setup.py b/setup.py
index 46261d7..57d63ca 100644
--- a/setup.py
+++ b/setup.py
@@ -56,7 +56,7 @@
 
 setup(
     name='freesasa',
-    version= '2.2.0a3',
+    version= '2.2.0a4',
     description='Calculate solvent accessible surface areas of proteins',
     long_description=long_description,
     author='Simon Mitternacht',